PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN16873.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 349aa    MW: 39401.1 Da    PI: 7.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN16873.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.4e-06168194430
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                 +h+ +Er RR++i +++ +L++l+P +
  KHN16873.1 168 SHSLAERVRREKISERMKTLQRLVPGC 194
                 8************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.87E-9162229No hitNo description
SuperFamilySSF474591.7E-14162241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-14164236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.97164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-7170230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MAAFSSQYYH PFLVDSACLS ITPPIINTSS TLPPSPHYLL NNNNIHIQET SYSVTNNQET  60
SCVDNQSSKV TTISDTEYSV VNKNHSPETS MVVDKLEKGE QFTQKVVTPM EKEKKRRARN  120
GSSKESTEGG NEKQKKPKEV KKDEKKGAED PPTGYIHVRA RRGQATDSHS LAERVRREKI  180
SERMKTLQRL VPGCDKAWSF TSLIFYVTGK ALVLDEIINY VQSLQNQVEF LSMKLALVNP  240
MFYDLAIDLD TLMVRPDQKL NYNIASPSPC LAQFRPNQAI AFADTTTTNS FPTANNGDYL  300
LDYSSSLFLQ GPRSNLFFEY NGGQFWDVED QRQKFLHPYG FGNNSGSFN
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0934920.0BT093492.1 Soybean clone JCVI-FLGm-24M5 unknown mRNA.
GenBankBT0949010.0BT094901.1 Soybean clone JCVI-FLGm-14F14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003532431.20.0PREDICTED: transcription factor bHLH137
TrEMBLA0A0B2QA180.0A0A0B2QA18_GLYSO; Transcription factor bHLH137
STRINGGLYMA08G01210.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-49bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]